BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021F10LP1|AL427796
(1013 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig478 980 0.0
3x_Contig408 438 e-123
>3x_Contig478
Length = 3300
Score = 980 bits (494), Expect = 0.0
Identities = 501/502 (99%), Gaps = 1/502 (0%)
Strand = Plus / Plus
Query: 1 gatcttcccatcggaccccagcagaggttccttagaaggctccttagaaggttctttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2800 gatcttcccatcggaccccagcagaggttccttagaaggctccttagaaggttctttaga 2859
Query: 61 gggcgattcggtgggatctatttcggtgtccattggggattggcttgtcagagatggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2860 gggcgattcggtgggatctatttcggtgtccattggggattggcttgtcagagatggagg 2919
Query: 121 ttgctggttcaactgcaagctataattggaatgagtttacattattgtgcgttactatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2920 ttgctggttcaactgcaagctataattggaatgagtttacattattgtgcgttactatat 2979
Query: 181 ggctggctatatgataaacataaagttgtaatgatgtagatgttcacgttagagcacggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2980 ggctggctatatgataaacataaagttgtaatgatgtagatgttcacgttagagcacggt 3039
Query: 241 agggtaatcactagatgctggaagattactatgtgtattacccggcgtagacagggtaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3040 agggtaatcactagatgctggaagattactatgtgtattacccggcgtagacagggtaat 3099
Query: 301 aaacactcataaaacatcttctaattgttattaccctgtctaatccgggtaatgataaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3100 aaacactcataaaacatcttctaattgttattaccctgtctaatccgggtaatgataaca 3159
Query: 361 cacgattaaatccgaaggctttttccccaggtcaattgtttcacccgctccgccacagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3160 cacgattaaatccgaaggctttttccccaggtcaattgtttcacccgctccgccacagat 3219
Query: 421 acgagtttcttataccccagacgcttaccctacctctaccccattggaccgtttcccaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3220 acgagtttcttataccccagacgcttaccctacctctaccccattggaccgtttcccaat 3279
Query: 481 caggtaaaaaaacagaaaccaa 502
||||| ||||||||||||||||
Sbjct: 3280 caggt-aaaaaacagaaaccaa 3300
>3x_Contig408
Length = 1650
Score = 438 bits (221), Expect = e-123
Identities = 243/249 (97%), Gaps = 1/249 (0%)
Strand = Plus / Plus
Query: 763 cgagattgggccgaggaacagtgtgctgtaccaatggaggattgcctggcaattatctag 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 cgagattgggccgaggaacagtgtgctgtaccaatggaggattgcctggcaattatctag 76
Query: 823 ctcggtgcactttgtatctggtagaagaatacgtggagagagggcgaaagatagtcatgg 882
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 ctcggtgcactttgtagctggtagaagaatacgtggagagagggcgaaagatagtcatgg 136
Query: 883 tgtcacgtgacagtttttttttttttgaacgccttgttttctggagttcccaattgacta 942
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tgtcacttaacagtttttttttttttgaacgccttgttttctggagttcccaattgactg 196
Query: 943 cccagatggaataggataacagaatgacgatggggatatcagttaccaagcaagtgtacc 1002
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 197 cccagatggaataggataacagaatgacgat-gggatatcagttagcaagcaagtgtacc 255
Query: 1003 atatcaagt 1011
|||||||||
Sbjct: 256 atatcaagt 264
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,096
Number of Sequences: 1807
Number of extensions: 13096
Number of successful extensions: 148
Number of sequences better than 1.0e-20: 2
length of query: 1013
length of database: 10,358,551
effective HSP length: 16
effective length of query: 997
effective length of database: 10,329,639
effective search space: 10298650083
effective search space used: 10298650083
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)